Similarity of introduced birds

source('../env.R')

Using GitHub PAT from the git credential store.
Skipping install of 'clootl' from a github remote, the SHA1 (834b5ba2) has not changed since last install.
  Use `force = TRUE` to force installation

Load required data

trait_data = read.csv(filename(TAXONOMY_OUTPUT_DIR, 'traits_ebird.csv')) %>% dplyr::select(ebird_species_name, beak_width, hwi, mass)
trait_data

community_data = read.csv(filename(COMMUNITY_OUTPUT_DIR, 'communities_for_analysis.csv')) %>% 
  dplyr::select(city_id, city_name, ebird_species_name, origin, relative_abundance_proxy) %>% 
  left_join(trait_data, by = 'ebird_species_name')
community_data

columbidae_tree = read.tree(filename(TAXONOMY_OUTPUT_DIR, 'phylogeny.tre'))
plot(columbidae_tree)

Find communities with introduced species

urban_introduced_species = community_data %>% filter(origin == 'Introduced') %>% filter(relative_abundance_proxy > 0)
urban_introduced_species

urban_native_species = community_data %>% filter(origin != 'Introduced') %>% filter(relative_abundance_proxy > 0)
urban_native_species

regional_native_species = community_data %>% filter(origin != 'Introduced') %>% filter(relative_abundance_proxy == 0)
regional_native_species

Find cities we can use to compare introduced species vs regional species

city_names = function(df) {
  df %>% dplyr::select(city_id, city_name) %>% distinct()
}

cities_available_for_test = purrr::reduce(
  list(
    city_names(urban_introduced_species),
    city_names(urban_native_species),
    city_names(regional_native_species)
  ),
  dplyr::intersect
)
cities_available_for_test

Look at creating required metrics for a single city

test_city = cities_available_for_test$city_name[1]

Distance to nearest species across functional traits

native_traits = urban_native_species %>%
  filter(city_name == test_city)

introduced_traits = urban_introduced_species %>%
  filter(city_name == test_city)

regional_traits = regional_native_species %>%
  filter(city_name == test_city)

introduced_traits %>%
  rowwise() %>%
  mutate(
    min_dist_beak_width = min(abs(beak_width - native_traits$beak_width)),
    min_dist_mass       = min(abs(mass - native_traits$mass)),
    min_dist_hwi        = min(abs(hwi - native_traits$hwi))
  ) %>%
  ungroup()

regional_traits %>%
  rowwise() %>%
  mutate(
    min_dist_beak_width = min(abs(beak_width - native_traits$beak_width)),
    min_dist_mass       = min(abs(mass - native_traits$mass)),
    min_dist_hwi        = min(abs(hwi - native_traits$hwi))
  ) %>%
  ungroup()

Distance to nearest species in phylogeny

communities_matrix =  function(urban_community, comparison_community) {
  urban = str_replace(urban_community$ebird_species_name, ' ', '_')
  compare = str_replace(comparison_community$ebird_species_name, ' ', '_')
  
  spp = c(urban, compare)

  comm = matrix(
    0,
    nrow = 1 + length(compare),
    ncol = length(spp),
    dimnames = list(c("urban", compare), spp)
  )

  comm["urban", urban] = 1
  comm[compare, compare] = 1
  comm
}

communities_matrix(native_traits, introduced_traits)

                      Patagioenas_fasciata Zenaida_macroura Columba_livia Streptopelia_decaocto
urban                                    1                1             0                     0
Columba_livia                            0                0             1                     1
Streptopelia_decaocto                    0                0             1                     1

communities_matrix(native_traits, regional_traits)

                    Patagioenas_fasciata Zenaida_macroura Columbina_passerina
urban                                  1                1                   0
Columbina_passerina                    0                0                   1

D = cophenetic(columbidae_tree)

min_phylo_distance = function(native_traits, compare_to_traits) {
  cdnt = picante::comdistnt(communities_matrix(native_traits, compare_to_traits), D)
  cdnt_m = as.matrix(cdnt)
  
  
  tibble(species = str_replace(compare_to_traits$ebird_species_name, ' ', '_')) %>%
      mutate(
        ebird_species_name = str_replace(species, '_', ' '),
        min_phylo_dist = cdnt_m[species, "urban"]
      ) %>% 
    dplyr::select(-species)
}

min_phylo_distance(native_traits, introduced_traits)

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

min_phylo_distance(native_traits, regional_traits)

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[306] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Create all metrics

min_trait_distances = function(given_city_id) {
  native = urban_native_species %>%
    filter(city_id == given_city_id)
  
  introduced = urban_introduced_species %>%
    filter(city_id == given_city_id)
  
  regional = regional_native_species %>%
    filter(city_id == given_city_id)
  
  rbind(
    introduced %>%
      rowwise() %>%
      mutate(
        min_dist_beak_width = min(abs(beak_width - native$beak_width)),
        min_dist_mass       = min(abs(mass - native$mass)),
        min_dist_hwi        = min(abs(hwi - native$hwi))
      ) %>%
      ungroup() %>%
      left_join(min_phylo_distance(native, introduced)) %>%
      mutate(type = 'Introduced')
    ,
    regional %>%
      rowwise() %>%
      mutate(
        min_dist_beak_width = min(abs(beak_width - native$beak_width)),
        min_dist_mass       = min(abs(mass - native$mass)),
        min_dist_hwi        = min(abs(hwi - native$hwi))
      ) %>%
      ungroup() %>%
      left_join(min_phylo_distance(native, regional)) %>%
      mutate(type = 'Available')
  ) %>%
  dplyr::select(city_id, city_name, ebird_species_name, type, min_dist_beak_width, min_dist_mass, min_dist_hwi, min_phylo_dist)
}

min_trait_distances(cities_available_for_test$city_id[1])

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[306] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

result_df = data.frame()

for (i in 1:nrow(cities_available_for_test)) {
  test_city_id = cities_available_for_test$city_id[i]
  result_df = rbind(result_df, min_trait_distances(test_city_id))
}

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[306] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[306] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[306] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[306] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[306] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_squammata"         
[321] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[326] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[306] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[306] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[306] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[256] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[261] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[266] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[271] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[276] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[281] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[286] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[291] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[296] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[301] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[306] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[306] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[306] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"              
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[316] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[321] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_passerina"          "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[306] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_passerina"          "Columbina_squammata"         
[316] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[321] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_aurita"               "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[296] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[301] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[306] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"          
[311] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[316] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[321] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_inca"               "Columbina_squammata"         
[321] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[326] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_aurita"               "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_aurita"               "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[306] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"         
[316] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[321] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_squammata"          "Columbina_cruziana"          
[316] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[321] "Paraclaravis_geoffroyi"       "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Starnoenas_cyanocephala"     
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zentrygon_albifacies"         "Zentrygon_frenata"           
[306] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_inca"              
[316] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[321] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_cyanopis"           "Columbina_minuta"            
[316] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_cyanopis"           "Columbina_talpacoti"         
[316] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[256] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[261] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[266] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[271] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[276] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[281] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[286] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[291] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[296] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[301] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[306] "Zenaida_asiatica"             "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_passerina"         
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[306] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[316] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[321] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[256] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[261] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[266] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[271] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[276] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[281] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[286] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[291] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[296] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[301] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[306] "Zenaida_asiatica"             "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_speciosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[256] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_speciosa"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Zenaida_meloda"               "Zenaida_auriculata"          
[301] "Zenaida_galapagoensis"        "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[306] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_inca"              
[316] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[321] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[321] "Columbina_squammata"          "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[316] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[316] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_inca"              
[316] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[321] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"               "Columbina_squammata"         
[321] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[326] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"              
[316] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[321] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"              
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[316] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[321] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"               "Columbina_cruziana"          
[321] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[306] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"               "Columbina_cruziana"          
[316] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[321] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"               "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"               "Columbina_cruziana"          
[316] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[321] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_speciosa"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[261] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[266] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[271] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[276] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[281] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zentrygon_albifacies"         "Zentrygon_frenata"           
[306] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[316] "Columbina_talpacoti"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[256] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_speciosa"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zentrygon_albifacies"         "Zentrygon_frenata"           
[306] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[316] "Columbina_talpacoti"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_inca"               "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"               "Columbina_cruziana"           "Columbina_picui"             
[316] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[321] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[306] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[326] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[331] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[256] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[261] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[266] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[271] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[276] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[281] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[286] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[291] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[296] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[301] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[306] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"              
[311] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[316] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[321] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_inca"               "Columbina_squammata"         
[326] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[331] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_inca"               "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[321] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"               "Columbina_cruziana"          
[316] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[321] "Paraclaravis_geoffroyi"       "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Metriopelia_aymara"           "Metriopelia_morenoi"          "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Metriopelia_morenoi"          "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_speciosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[261] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[266] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[271] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[276] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[281] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[256] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_speciosa"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"               "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_inca"              
[316] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[321] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[306] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[326] "Columbina_cruziana"           "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[306] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[326] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[331] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[256] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[261] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[266] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[271] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[276] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[281] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[286] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[291] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[296] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[301] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[306] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_aurita"              
[311] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[316] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[321] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_inca"               "Columbina_squammata"         
[326] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[331] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[256] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[261] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[266] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[271] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[276] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[281] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[286] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[291] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[296] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[301] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[306] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[326] "Columbina_cruziana"           "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_passerina"          "Columbina_inca"               "Columbina_cruziana"          
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_passerina"         
[316] "Columbina_inca"               "Columbina_cruziana"           "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[321] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[251] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_passerina"          "Columbina_inca"               "Columbina_cruziana"          
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_megalura"          
[296] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"       
[301] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_passerina"          "Columbina_inca"               "Columbina_cruziana"          
[316] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_mondetoura"     
[321] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_passerina"          "Columbina_inca"              
[321] "Columbina_squammata"          "Columbina_cruziana"           "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[326] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[321] "Columbina_cruziana"           "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[326] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[306] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[311] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_passerina"         
[316] "Columbina_inca"               "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[321] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_megalura"          
[296] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"       
[301] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_passerina"          "Columbina_inca"               "Columbina_cruziana"          
[316] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[321] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[321] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[326] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_megalura"          
[296] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"       
[301] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[316] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[321] "Metriopelia_melanoptera"      "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[236] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[241] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[246] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_passerina"          "Columbina_inca"              
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[231] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[236] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[241] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[246] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_corensis"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_megalura"          
[296] "Leptotila_jamaicensis"        "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_galapagoensis"       
[301] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[316] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[321] "Metriopelia_melanoptera"      "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[246] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[251] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[256] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[261] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[266] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[271] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[276] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[281] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[286] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[291] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[296] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[301] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[306] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[311] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[316] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[321] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[326] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[331] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[206] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[211] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[216] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[221] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[226] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_bollii"              
[226] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[236] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Patagioenas_araucana"        
[241] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[246] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[251] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[256] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[261] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[266] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[271] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[276] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[281] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Turtur_abyssinicus"           "Turtur_afer"                  "Turtur_brehmeri"             
[191] "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"     
[196] "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"    
[201] "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_reichenowi"     
[206] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[211] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[216] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[221] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[226] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[231] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[236] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Patagioenas_araucana"         "Patagioenas_caribaea"        
[241] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[246] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[251] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[256] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[261] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[266] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[271] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[276] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[281] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[286] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[291] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[296] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[321] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[326] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_phoenicopterus"        "Treron_bicinctus"            
[126] "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"            
[131] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[136] "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[141] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[146] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[151] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[156] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[161] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[166] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[171] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[176] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[181] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"    
[186] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_brehmeri"             
[191] "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"         
[196] "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_vinacea"        
[201] "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_reichenowi"      "Columba_albinucha"           
[206] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[211] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[216] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[221] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[226] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[231] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[236] "Spilopelia_chinensis"         "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[241] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[246] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[251] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[256] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[261] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[266] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[271] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[276] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[281] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[286] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[291] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[296] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[301] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[316] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_phoenicopterus"        "Treron_bicinctus"            
[126] "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"            
[131] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[136] "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[141] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[146] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[151] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[156] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[161] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[166] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[171] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[176] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[181] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"    
[186] "Chalcophaps_stephani"         "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_brehmeri"              "Aplopelia_larvata"           
[191] "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"     
[196] "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[201] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[206] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_vitiensis"           
[211] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[216] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_bollii"              
[221] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[226] "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[231] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[236] "Spilopelia_chinensis"         "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[241] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[246] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[251] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[256] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[261] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[266] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[271] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[276] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[281] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[286] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[291] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[296] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[301] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[316] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_phoenicopterus"        "Treron_bicinctus"            
[126] "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"            
[131] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[136] "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[141] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[146] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[151] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[156] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[161] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[166] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[171] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[176] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[181] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"    
[186] "Chalcophaps_stephani"         "Turtur_abyssinicus"           "Turtur_afer"                  "Turtur_brehmeri"              "Streptopelia_bitorquata"     
[191] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_tranquebarica"  
[196] "Streptopelia_xanthocycla"     "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[201] "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"            
[206] "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"              
[211] "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"         
[216] "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_bollii"               "Columba_palumbus"            
[221] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"           
[226] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[231] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Patagioenas_araucana"        
[236] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[241] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[246] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[251] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[256] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[261] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[266] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[271] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[276] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[281] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[286] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[291] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[296] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[301] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[306] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[311] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[316] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[321] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_phoenicopterus"        "Treron_bicinctus"            
[126] "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"            
[131] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[136] "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[141] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[146] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[151] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[156] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[161] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[166] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[171] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[176] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[181] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"    
[186] "Chalcophaps_stephani"         "Turtur_abyssinicus"           "Turtur_afer"                  "Turtur_brehmeri"              "Streptopelia_bitorquata"     
[191] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_tranquebarica"  
[196] "Streptopelia_xanthocycla"     "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[201] "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"            
[206] "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"              
[211] "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"         
[216] "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_bollii"               "Columba_palumbus"            
[221] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[226] "Columba_rupestris"            "Columba_thomensis"            "Columba_junoniae"             "Columba_malherbii"            "Columba_iriditorques"        
[231] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Patagioenas_araucana"         "Patagioenas_caribaea"        
[236] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[241] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[246] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[251] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[256] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[261] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[266] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[271] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[276] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[281] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[286] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[291] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[296] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[301] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[306] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[311] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[316] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[321] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_eversmanni"           "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[191] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[196] "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"      "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"       
[201] "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_reichenowi"     
[206] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[211] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[216] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[221] "Columba_torringtoniae"        "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[226] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_thomensis"            "Columba_junoniae"            
[231] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[236] "Spilopelia_chinensis"         "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[241] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[246] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[251] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[256] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[261] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[266] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[271] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[276] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[281] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[286] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[291] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[296] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[301] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[316] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_brehmeri"             
[191] "Turtur_tympanistria"          "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_orientalis"     
[196] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[201] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[206] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[211] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[216] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_bollii"              
[221] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[226] "Columba_livia"                "Columba_rupestris"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[231] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[236] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[241] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[246] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[251] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[256] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[261] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[266] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[271] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[276] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[281] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[286] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[291] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[296] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[301] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[306] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_bicinctus"            
[126] "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"            
[131] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[136] "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[141] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[146] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[151] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[156] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[161] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[166] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[171] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[176] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[181] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"        
[186] "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"             
[191] "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"     
[196] "Streptopelia_turtur"          "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"        
[201] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[206] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[211] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[216] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[221] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[226] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[231] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[236] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[241] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[246] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[251] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[256] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[261] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[266] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[271] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[276] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[281] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[286] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[291] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[296] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[321] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[326] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"           
 [91] "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"              
 [96] "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"             
[101] "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"          
[106] "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"    
[111] "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"              
[116] "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"           
[121] "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_formosae"              "Treron_vernans"              
[126] "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"             "Treron_oxyurus"               "Treron_seimundi"             
[131] "Treron_chloropterus"          "Treron_griseicauda"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[136] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[141] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[146] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[151] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[156] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[161] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[166] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[171] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[176] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"        
[181] "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"             
[186] "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"     
[191] "Streptopelia_turtur"          "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"        
[196] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[201] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[206] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[211] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[216] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[221] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[226] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[231] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[236] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[241] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[246] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[251] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[256] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[261] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[266] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[271] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[276] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[281] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[286] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[291] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[296] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[301] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[306] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[311] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[316] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[321] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_formosae"             
[126] "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"             
[131] "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"           "Treron_curvirostra"          
[136] "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"               "Treron_capellei"             
[141] "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"          
[146] "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"    
[151] "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"             "Geopelia_striata"            
[156] "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"            
[161] "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"     
[166] "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"      
[171] "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"           
[176] "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"     
[181] "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"               
[186] "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"         
[191] "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"         
[196] "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"        
[201] "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[206] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[211] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[216] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[221] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"            
[226] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"           
[231] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[236] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[241] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[246] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[251] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[256] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[261] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[266] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[271] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[276] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[281] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"           
 [91] "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"              
 [96] "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"             
[101] "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"          
[106] "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"    
[111] "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"              
[116] "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"           
[121] "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_formosae"              "Treron_vernans"              
[126] "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"              
[131] "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"           "Treron_floris"                "Treron_psittaceus"           
[136] "Treron_teysmannii"            "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[141] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[146] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[151] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[156] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[161] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[166] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[171] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[176] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"    
[181] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[186] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[191] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"       
[196] "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[201] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[206] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[211] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[216] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"            
[221] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[226] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[231] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"     
[236] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[241] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[246] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[251] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[256] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[261] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[266] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[271] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[276] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[281] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[286] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[291] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[296] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[301] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[306] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_bicinctus"            
[126] "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"            
[131] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[136] "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[141] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[146] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[151] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[156] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[161] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[166] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[171] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[176] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[181] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"    
[186] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[191] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[196] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_xanthocycla"    
[201] "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"   
[206] "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"            
[211] "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"              
[216] "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"         
[221] "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"              
[226] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"     
[241] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[246] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[251] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[256] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[261] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[266] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[271] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[276] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[281] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"           
 [91] "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"              
 [96] "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"             
[101] "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"          
[106] "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"    
[111] "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"              
[116] "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"           
[121] "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_formosae"              "Treron_vernans"              
[126] "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"             "Treron_oxyurus"               "Treron_seimundi"             
[131] "Treron_chloropterus"          "Treron_griseicauda"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[136] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[141] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[146] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[151] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[156] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[161] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[166] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[171] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[176] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"    
[181] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[186] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[191] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"       
[196] "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[201] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[206] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[211] "Columba_argentina"            "Columba_elphinstonii"         "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[216] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[221] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[226] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[231] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[236] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[241] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[246] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[251] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[256] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[261] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[266] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[271] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[276] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[281] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[286] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[291] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[296] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[301] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[306] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[311] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[316] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[321] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"    
[186] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[191] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[196] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_xanthocycla"    
[201] "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"           
 [91] "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"              
 [96] "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"             
[101] "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_lacernulata"           "Ducula_cineracea"            
[106] "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"              
[111] "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"           
[116] "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"               
[121] "Treron_sanctithomae"          "Treron_calvus"                "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"            
[126] "Treron_sieboldii"             "Treron_sphenurus"             "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[131] "Treron_griseicauda"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_capellei"             
[136] "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"          
[141] "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"    
[146] "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"             "Geopelia_striata"            
[151] "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"            
[156] "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"     
[161] "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"      
[166] "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"           
[171] "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"     
[176] "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"               
[181] "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"         
[186] "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"         
[191] "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"    
[196] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[201] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[206] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[211] "Columba_palumboides"          "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"              
[216] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[221] "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[226] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[231] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[236] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[241] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[246] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[251] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[256] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[261] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[266] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[271] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[276] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[281] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[286] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[291] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[296] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[301] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[306] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[311] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[316] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[321] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"            
[131] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[136] "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_capellei"             
[141] "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"          
[146] "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"    
[151] "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"             "Ocyphaps_lophotes"           
[156] "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"      
[161] "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"          
[166] "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"           
[171] "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"       
[176] "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"        
[181] "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"               
[186] "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"         
[191] "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"         
[196] "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"        
[201] "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[206] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[211] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[216] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[221] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"            
[226] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"           
[231] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[236] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[241] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[246] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[251] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[256] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[261] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[266] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[271] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[276] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[281] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"           
 [91] "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"              
 [96] "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"             
[101] "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"          
[106] "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"    
[111] "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"              
[116] "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"           
[121] "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"        "Treron_bicinctus"            
[126] "Treron_formosae"              "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"             
[131] "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"           "Treron_curvirostra"          
[136] "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_capellei"              "Treron_fulvicollis"          
[141] "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"        
[146] "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"            
[151] "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"           
[156] "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"      
[161] "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"          
[166] "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"           
[171] "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"       
[176] "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"        
[181] "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"               
[186] "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"         
[191] "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"         
[196] "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"        
[201] "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[206] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[211] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[216] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[221] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"            
[226] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"     
[241] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[246] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[251] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[256] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[261] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[266] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[271] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[276] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[281] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"        
 [91] "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"             
 [96] "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"          
[101] "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"           "Ducula_cineracea"            
[106] "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"              
[111] "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"           
[116] "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"               
[121] "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"        "Treron_bicinctus"             "Treron_formosae"             
[126] "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"              
[131] "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"           "Treron_floris"                "Treron_psittaceus"           
[136] "Treron_teysmannii"            "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Otidiphaps_nobilis"          
[141] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[146] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[151] "Geopelia_placida"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[156] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[161] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[166] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[171] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[176] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"        
[181] "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"             
[186] "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"     
[191] "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"    
[196] "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[201] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[206] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[211] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[216] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[221] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[226] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[231] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[236] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[241] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[246] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[251] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[256] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[261] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[266] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[271] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[276] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[281] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[286] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[291] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[296] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[301] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[316] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"      
 [56] "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"        "Gymnophaps_albertisii"       
 [61] "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"   
 [66] "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"              "Ducula_nicobarica"           
 [71] "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"           "Ducula_whartoni"             
 [76] "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"               "Ducula_geelvinkiana"         
 [81] "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"                "Ducula_melanochroa"          
 [86] "Ducula_mullerii"              "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"           
 [91] "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"             
 [96] "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"              
[101] "Ducula_poliocephala"          "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                
[106] "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"          
[111] "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"            
[116] "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"               
[121] "Treron_phoenicopterus"        "Treron_formosae"              "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"            
[126] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[131] "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"               "Otidiphaps_nobilis"          
[136] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[141] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[146] "Geopelia_placida"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[151] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[156] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[161] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[166] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[171] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"        
[176] "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"             
[181] "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"     
[186] "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"    
[191] "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[196] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[201] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[206] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[211] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[216] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[221] "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[226] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[231] "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[236] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[241] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[246] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[251] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[256] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[261] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[266] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[271] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[276] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[281] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[286] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[291] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[296] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[301] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[306] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[311] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[316] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[321] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"      
 [56] "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"        "Gymnophaps_albertisii"       
 [61] "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"   
 [66] "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"           
 [91] "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"              
 [96] "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"             
[101] "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"          
[106] "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"    
[111] "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"              
[116] "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"           
[121] "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"        "Treron_formosae"             
[126] "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"              
[131] "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"           "Treron_floris"                "Treron_psittaceus"           
[136] "Treron_teysmannii"            "Treron_phayrei"               "Treron_fulvicollis"           "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[141] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[146] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[151] "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"            
[156] "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"     
[161] "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"      
[166] "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"           
[171] "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"     
[176] "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"               
[181] "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"         
[186] "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"         
[191] "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"       
[196] "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"   
[201] "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"            
[206] "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"              
[211] "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"         
[216] "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"              
[221] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[226] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[231] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"     
[236] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[241] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[246] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[251] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[256] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[261] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[266] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[271] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[276] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[281] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[286] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[291] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[296] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[301] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[306] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"      
 [56] "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"        "Gymnophaps_albertisii"       
 [61] "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"   
 [66] "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"              "Ducula_nicobarica"           
 [71] "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"           "Ducula_whartoni"             
 [76] "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"               "Ducula_geelvinkiana"         
 [81] "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"                "Ducula_melanochroa"          
 [86] "Ducula_mullerii"              "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"           
 [91] "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"             
 [96] "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"              
[101] "Ducula_poliocephala"          "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                
[106] "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"          
[111] "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"            
[116] "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"               
[121] "Treron_phoenicopterus"        "Treron_formosae"              "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"            
[126] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[131] "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"               "Otidiphaps_nobilis"          
[136] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[141] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[146] "Geopelia_placida"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[151] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[156] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[161] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[166] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[171] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"        
[176] "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"             
[181] "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"     
[186] "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"    
[191] "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[196] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[201] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[206] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[211] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[216] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[221] "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[226] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[231] "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[236] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[241] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[246] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[251] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[256] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[261] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[266] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[271] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[276] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[281] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[286] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[291] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[296] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[301] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[306] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[311] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[316] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[321] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[141] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[146] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[151] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[156] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[161] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[166] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[171] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[176] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[181] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"    
[186] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[191] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[196] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_xanthocycla"    
[201] "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"           
 [91] "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"              
 [96] "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"             
[101] "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_lacernulata"           "Ducula_cineracea"            
[106] "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"              
[111] "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"           
[116] "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"               
[121] "Treron_sanctithomae"          "Treron_calvus"                "Treron_formosae"              "Treron_pompadora"             "Treron_sieboldii"            
[126] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[131] "Treron_griseicauda"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[136] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[141] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[146] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[151] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[156] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[161] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[166] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[171] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[176] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"    
[181] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[186] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[191] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_xanthocycla"    
[196] "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[201] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[206] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[211] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_palumboides"         
[216] "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"              
[221] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[226] "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[231] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[236] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[241] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[246] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[251] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[256] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[261] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[266] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[271] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[276] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[281] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[286] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[291] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[296] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[301] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[316] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"      
 [56] "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"        "Gymnophaps_albertisii"       
 [61] "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"   
 [66] "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"              "Ducula_nicobarica"           
 [71] "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"           "Ducula_whartoni"             
 [76] "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"               "Ducula_geelvinkiana"         
 [81] "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"                "Ducula_melanochroa"          
 [86] "Ducula_mullerii"              "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"           
 [91] "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"             
 [96] "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"              
[101] "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"               
[106] "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"             
[111] "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"            
[116] "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"         
[121] "Treron_calvus"                "Treron_phoenicopterus"        "Treron_bicinctus"             "Treron_formosae"              "Treron_pompadora"            
[126] "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"             
[131] "Treron_chloropterus"          "Treron_griseicauda"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[136] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[141] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[146] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[151] "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"            
[156] "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"     
[161] "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"      
[166] "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"           
[171] "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"     
[176] "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"               
[181] "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"         
[186] "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"         
[191] "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"        
[196] "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[201] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[206] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[211] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[216] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"            
[221] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"           
[226] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[231] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[236] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[241] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[246] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[251] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[256] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[261] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[266] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[271] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[276] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[281] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[286] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[291] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[296] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[301] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[306] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[311] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[316] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[321] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"      
 [56] "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"        "Gymnophaps_albertisii"       
 [61] "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"   
 [66] "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"              "Ducula_nicobarica"           
 [71] "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"           "Ducula_whartoni"             
 [76] "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"               "Ducula_geelvinkiana"         
 [81] "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"                "Ducula_melanochroa"          
 [86] "Ducula_mullerii"              "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"           
 [91] "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"             
 [96] "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"              
[101] "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"               
[106] "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"             
[111] "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"            
[116] "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"         
[121] "Treron_calvus"                "Treron_phoenicopterus"        "Treron_bicinctus"             "Treron_formosae"              "Treron_pompadora"            
[126] "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"             
[131] "Treron_chloropterus"          "Treron_griseicauda"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[136] "Treron_phayrei"               "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"        
[141] "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"            
[146] "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"           
[151] "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"      
[156] "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"         
[161] "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"         
[166] "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"       
[171] "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"           
[176] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[181] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[186] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[191] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"    
[196] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[201] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[206] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[211] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[216] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[221] "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"           
[226] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[231] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[236] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[241] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[246] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[251] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[256] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[261] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[266] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[271] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[276] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[281] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[286] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[291] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[296] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[301] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[306] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[311] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[316] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[321] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"            
[161] "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"     
[166] "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"      
[171] "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"           
[176] "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"     
[181] "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"     "Chalcophaps_stephani"        
[186] "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"             
[191] "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"     
[196] "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"    
[201] "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[246] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[251] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[256] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[261] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[266] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[271] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[276] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[281] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"            
[161] "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"          
[166] "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"           
[171] "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"       
[176] "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"        
[181] "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"               
[186] "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"         
[191] "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"         
[196] "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"       
[201] "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"   
[206] "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"            
[211] "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"              
[216] "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"         
[221] "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"              
[226] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"    
[186] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[191] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[196] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"       
[201] "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[206] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[211] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[216] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[221] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"            
[226] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"           
[231] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[236] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[241] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[246] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[251] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[256] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[261] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[266] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[271] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[276] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[281] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sphenurus"            
[131] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[136] "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[141] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[146] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[151] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[156] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[161] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[166] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[171] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[176] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[181] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"        
[186] "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"             
[191] "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"     
[196] "Streptopelia_turtur"          "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"        
[201] "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[206] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[211] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[216] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[221] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"            
[226] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"     
[241] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[246] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[251] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[256] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[261] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[266] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[271] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[276] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[281] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"    
[186] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[191] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[196] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"       
[201] "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[206] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[211] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[216] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[221] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"            
[226] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"           
[231] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[236] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[241] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[246] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[251] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[256] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[261] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[266] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[271] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[276] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[281] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sphenurus"            
[131] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[136] "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[141] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[146] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[151] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[156] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[161] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[166] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[171] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[176] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[181] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"        
[186] "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"             
[191] "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"     
[196] "Streptopelia_turtur"          "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"        
[201] "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[206] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[211] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[216] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[221] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"            
[226] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"     
[241] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[246] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[251] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[256] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[261] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[266] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[271] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[276] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[281] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sphenurus"            
[131] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[136] "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[141] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[146] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[151] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"            
[156] "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[161] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[166] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[171] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[176] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[181] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"    
[186] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[191] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[196] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_lugens"          "Streptopelia_xanthocycla"     "Streptopelia_capicola"       
[201] "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"   
[206] "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"            
[211] "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"              
[216] "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"         
[221] "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"              
[226] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"     
[241] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[246] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[251] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[256] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[261] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[266] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[271] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[276] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[281] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"      
 [56] "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"        "Gymnophaps_albertisii"       
 [61] "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"   
 [66] "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"           
 [91] "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"              
 [96] "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"             
[101] "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"          
[106] "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"    
[111] "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"              
[116] "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"           
[121] "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"        "Treron_bicinctus"            
[126] "Treron_vernans"               "Treron_pompadora"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"              
[131] "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"               
[136] "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"          
[141] "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"        
[146] "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"            
[151] "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"           
[156] "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"      
[161] "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"          
[166] "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"           
[171] "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"       
[176] "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"        
[181] "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"          
[186] "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"           
[191] "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_lugens"         
[196] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"    
[201] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[206] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[211] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[216] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[221] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[226] "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"           
[231] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[236] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[241] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[246] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[251] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[256] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[261] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[266] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[271] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[276] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[281] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[286] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[291] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[296] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[321] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[326] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_lugens"          "Streptopelia_xanthocycla"    
[201] "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[206] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[211] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[216] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[221] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[226] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[231] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[236] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"      
 [56] "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"        "Gymnophaps_albertisii"       
 [61] "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"   
 [66] "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"           
 [91] "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"              
 [96] "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"             
[101] "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"          
[106] "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"    
[111] "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"              
[116] "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"           
[121] "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"        "Treron_bicinctus"            
[126] "Treron_vernans"               "Treron_pompadora"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"              
[131] "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"               
[136] "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"          
[141] "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"        
[146] "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"            
[151] "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"           
[156] "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"      
[161] "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"          
[166] "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"           
[171] "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"       
[176] "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"        
[181] "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"          
[186] "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"           
[191] "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_lugens"         
[196] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"    
[201] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[206] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[211] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[216] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[221] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[226] "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"           
[231] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[236] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[241] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[246] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[251] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[256] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[261] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[266] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[271] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[276] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[281] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[286] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[291] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[296] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[321] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[326] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[161] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[166] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[171] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[176] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[181] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[186] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[191] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[196] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[201] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"    
[206] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[211] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[216] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[221] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[226] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[231] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[236] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[241] "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[246] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[251] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[256] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[261] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"      
[266] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[271] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"        
[276] "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris" 
[281] "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"           
[286] "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"         
[291] "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"       
[296] "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"       
[301] "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"          
[306] "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"           
[311] "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"     
[316] "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"            
[321] "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"          
[326] "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"     
[331] "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"      
 [56] "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"        "Gymnophaps_albertisii"       
 [61] "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"   
 [66] "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"           
 [91] "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"              
 [96] "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"             
[101] "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"          
[106] "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"    
[111] "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"              
[116] "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"           
[121] "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"        "Treron_bicinctus"            
[126] "Treron_vernans"               "Treron_pompadora"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"              
[131] "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"               
[136] "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"          
[141] "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"        
[146] "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"            
[151] "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"             "Geopelia_striata"             "Ocyphaps_lophotes"           
[156] "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"      
[161] "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"          
[166] "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"           
[171] "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"       
[176] "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"        
[181] "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"          
[186] "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"           
[191] "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_lugens"         
[196] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"    
[201] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[206] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[211] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[216] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[221] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[226] "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"           
[231] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[236] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[241] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[246] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[251] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[256] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[261] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[266] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[271] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[276] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[281] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[286] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[291] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[296] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[321] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[326] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_nainus"            "Ptilinopus_layardi"          
 [46] "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"      "Ptilinopus_subgularis"       
 [51] "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"      
 [56] "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"        "Gymnophaps_albertisii"       
 [61] "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"   
 [66] "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"        
 [91] "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"             
 [96] "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"          
[101] "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"           "Ducula_cineracea"            
[106] "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"              
[111] "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"           
[116] "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"               
[121] "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"        "Treron_formosae"              "Treron_pompadora"            
[126] "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"             
[131] "Treron_chloropterus"          "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[136] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[141] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[146] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[151] "Geopelia_placida"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"           "Geophaps_scripta"            
[156] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[161] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[166] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[171] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[176] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"     "Chalcophaps_stephani"        
[181] "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"             
[186] "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"         
[191] "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"       
[196] "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"   
[201] "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"            
[206] "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"              
[211] "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"         
[216] "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"              
[221] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[226] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[231] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"     
[236] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[241] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[246] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[251] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[256] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[261] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[266] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[271] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[276] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[281] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[286] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[291] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[296] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[301] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[306] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_arcanus"           "Ptilinopus_nainus"            "Ptilinopus_layardi"           "Ptilinopus_luteovirens"      
 [46] "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"      "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"      
 [51] "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"       "Ptilinopus_marchei"          
 [56] "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"        "Gymnophaps_albertisii"        "Gymnophaps_mada"             
 [61] "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"     
 [66] "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"        
 [71] "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"              
 [76] "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"        
 [81] "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"             
 [86] "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                
 [91] "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"           
 [96] "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"         
[101] "Ducula_badia"                 "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Didunculus_strigirostris"    
[106] "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"              
[111] "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"           
[116] "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"        "Treron_formosae"             
[121] "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"              
[126] "Treron_seimundi"              "Treron_chloropterus"          "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"           
[131] "Treron_teysmannii"            "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                 
[136] "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"       
[141] "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"          
[146] "Geopelia_maugeus"             "Geopelia_placida"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[151] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[156] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[161] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[166] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[171] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"    
[176] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[181] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"     
[186] "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"    
[191] "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[196] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[201] "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"           
[206] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[211] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[216] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[221] "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[226] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[231] "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[236] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[241] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[246] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[251] "Macropygia_cinnamomea"        "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_doreya"           
[256] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[261] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[266] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[271] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[276] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[281] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[286] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[291] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[296] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[301] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[306] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[311] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[316] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"        
 [91] "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"             
 [96] "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"          
[101] "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"           "Ducula_cineracea"            
[106] "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"              
[111] "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"           
[116] "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"               
[121] "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"        "Treron_bicinctus"             "Treron_formosae"             
[126] "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"              
[131] "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"               
[136] "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"          
[141] "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"        
[146] "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"            
[151] "Geopelia_humeralis"           "Geopelia_maugeus"             "Geopelia_placida"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"           
[156] "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"      
[161] "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"         
[166] "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"         
[171] "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"       
[176] "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"           
[181] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[186] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[191] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[196] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[201] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[206] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[211] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[216] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[221] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[226] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"           
[231] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[236] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[241] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[246] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[251] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[256] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"     
[261] "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"            
[266] "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"          
[271] "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"    
[276] "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"          
[281] "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"         
[286] "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"   
[291] "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"          
[296] "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"              
[301] "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"        
[306] "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"         
[311] "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"          
[316] "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"         
[321] "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"         
[326] "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"      
 [56] "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"        "Gymnophaps_albertisii"       
 [61] "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"   
 [66] "Lopholaimus_antarcticus"      "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"              "Ducula_nicobarica"           
 [71] "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"           "Ducula_whartoni"             
 [76] "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"               "Ducula_geelvinkiana"         
 [81] "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"                "Ducula_melanochroa"          
 [86] "Ducula_mullerii"              "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"           
 [91] "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"             
 [96] "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"              
[101] "Ducula_poliocephala"          "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                
[106] "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"          
[111] "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"            
[116] "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"               
[121] "Treron_phoenicopterus"        "Treron_bicinctus"             "Treron_formosae"              "Treron_pompadora"             "Treron_sieboldii"            
[126] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[131] "Treron_griseicauda"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[136] "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"       
[141] "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"          
[146] "Geopelia_maugeus"             "Geopelia_placida"             "Ocyphaps_lophotes"            "Phaps_chalcoptera"            "Geophaps_plumifera"          
[151] "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"               
[156] "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[161] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[166] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[171] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_longirostris"    
[176] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[181] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[186] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[191] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"    
[196] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[201] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"           
[206] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[211] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[216] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[221] "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"           
[226] "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"        
[231] "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"        
[236] "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"    
[241] "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"         
[246] "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"        
[251] "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_phasianella"      
[256] "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"    
[261] "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[266] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[271] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[276] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[281] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[286] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[291] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[296] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[301] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[306] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[311] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[316] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[321] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_placida"             "Geopelia_striata"             "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"            
[161] "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"            "Leucosarcia_melanoleuca"     
[166] "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"      
[171] "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"           
[176] "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"     
[181] "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"     "Chalcophaps_stephani"        
[186] "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"             
[191] "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"     
[196] "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"    
[201] "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_decipiens"       "Streptopelia_semitorquata"   
[206] "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"            
[211] "Columba_pallidiceps"          "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"              
[216] "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"         
[221] "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"              
[226] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"     
[241] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[246] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[251] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[256] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[261] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[266] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[271] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[276] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[281] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_striata"             "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"      
[161] "Petrophassa_rufipennis"       "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"         
[166] "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"         
[171] "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"       
[176] "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"           
[181] "Chalcophaps_indica"           "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"          
[186] "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"           
[191] "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"     
[196] "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"        
[201] "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[206] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[211] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[216] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[221] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"            
[226] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"               
[231] "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"         
[236] "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"        
[241] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[246] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[251] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[256] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[261] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"      
[266] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[271] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[276] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[281] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[286] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[291] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[296] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[301] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[306] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[311] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[316] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[321] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[326] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[331] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_striata"             "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"      
[161] "Petrophassa_rufipennis"       "Phaps_histrionica"            "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"         
[166] "Pampusana_stairi"             "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"         
[171] "Pampusana_xanthonura"         "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"       
[176] "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"           
[181] "Chalcophaps_indica"           "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"          
[186] "Turtur_chalcospilos"          "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"           
[191] "Streptopelia_bitorquata"      "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"     
[196] "Streptopelia_lugens"          "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"        
[201] "Streptopelia_decaocto"        "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"     
[206] "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"         
[211] "Columba_leucomela"            "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"           
[216] "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"       
[221] "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"            
[226] "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"           
[231] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[236] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"        
[241] "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"        
[246] "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"    
[251] "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"        
[256] "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"       
[261] "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"            "Macropygia_macassariensis"   
[266] "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"      "Macropygia_ruficeps"         
[271] "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"            "Reinwardtoena_browni"        
[276] "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"           "Geotrygon_leucometopia"      
[281] "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"         "Geotrygon_montana"           
[286] "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"           "Leptotila_conoveri"          
[291] "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"            "Leptotila_rufaxilla"         
[296] "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"      "Zenaida_asiatica"            
[301] "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"             "Zenaida_aurita"              
[306] "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"           "Zentrygon_carrikeri"         
[311] "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"            "Columbina_buckleyi"          
[316] "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"          "Columbina_inca"              
[321] "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"           "Metriopelia_ceciliae"        
[326] "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Lopholaimus_antarcticus"      "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"             
 [71] "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"          
 [76] "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"             
 [81] "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"            
 [86] "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"             
 [91] "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"              
 [96] "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"           
[101] "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                
[106] "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"         
[111] "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"              
[116] "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"            
[121] "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"       
[126] "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"            
[131] "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"         
[136] "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"           
[141] "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"          
[146] "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"       
[151] "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_humeralis"           "Geopelia_maugeus"            
[156] "Geopelia_striata"             "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"      
[161] "Petrophassa_rufipennis"       "Phaps_histrionica"            "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[166] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[171] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[176] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[181] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[186] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[191] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[196] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[201] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[206] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_leucomela"           
[211] "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"           
[216] "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"       
[221] "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"          
[226] "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"            "Columba_livia"                "Columba_rupestris"           
[231] "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"           
[236] "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"          "Spilopelia_chinensis"         "Spilopelia_senegalensis"     
[241] "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"      "Patagioenas_corensis"        
[246] "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"         "Patagioenas_goodsoni"        
[251] "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"     "Patagioenas_speciosa"        
[256] "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"        "Macropygia_emiliana"         
[261] "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_phasianella"       "Macropygia_modiglianii"       "Macropygia_doreya"           
[266] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[271] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[276] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[281] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[286] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[291] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[296] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[301] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[306] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[311] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[316] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[321] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[326] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[331] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Ptilinopus_magnificus"       
 [61] "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"      
 [66] "Hemiphaga_novaeseelandiae"    "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"             
 [71] "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"          
 [76] "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"              
 [81] "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"               
 [86] "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"           
 [91] "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"              
 [96] "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"             
[101] "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"          
[106] "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"    
[111] "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"              
[116] "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"           
[121] "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"        "Treron_bicinctus"            
[126] "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"            
[131] "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"          
[136] "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"              
[141] "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"      
[146] "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"       
[151] "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_maugeus"             "Geopelia_placida"             "Geopelia_striata"            
[156] "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"      
[161] "Phaps_elegans"                "Phaps_histrionica"            "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[166] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[171] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[176] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[181] "Chalcophaps_longirostris"     "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"         
[186] "Turtur_afer"                  "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"     
[191] "Streptopelia_dusumieri"       "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"         
[196] "Streptopelia_tranquebarica"   "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"       
[201] "Streptopelia_roseogrisea"     "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"           
[206] "Columba_hodgsonii"            "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_unicincta"           
[211] "Columba_vitiensis"            "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"        
[216] "Columba_punicea"              "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"         
[221] "Columba_guinea"               "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"               
[226] "Columba_oliviae"              "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"           
[231] "Columba_junoniae"             "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"             
[236] "Nesoenas_picturatus"          "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[241] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[246] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[251] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[256] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_modiglianii"      
[261] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[266] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[271] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[276] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[281] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[286] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[291] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[296] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[301] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[306] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[311] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[316] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[321] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[326] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"        "Ptilinopus_rivoli"           
 [36] "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_alligator"         "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"          
 [41] "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"            "Ptilinopus_layardi"           "Ptilinopus_luteovirens"      
 [46] "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"      "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"      
 [51] "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"       "Ptilinopus_marchei"          
 [56] "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"         
 [61] "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"    "Ducula_aenea"                 "Ducula_carola"               
 [66] "Ducula_neglecta"              "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"           
 [71] "Ducula_pickeringii"           "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"              
 [76] "Ducula_pacifica"              "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"             
 [81] "Ducula_rubricera"             "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"              
 [86] "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                
 [91] "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"           
 [96] "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"         
[101] "Ducula_badia"                 "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                
[106] "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"          
[111] "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"            
[116] "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"               
[121] "Treron_phoenicopterus"        "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"            
[126] "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"             
[131] "Treron_chloropterus"          "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"           
[136] "Treron_teysmannii"            "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                 
[141] "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"       
[146] "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_maugeus"            
[151] "Geopelia_striata"             "Geophaps_plumifera"           "Geophaps_scripta"             "Geophaps_smithii"             "Petrophassa_albipennis"      
[156] "Petrophassa_rufipennis"       "Phaps_histrionica"            "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"            
[161] "Pampusana_sanctaecrucis"      "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"        
[166] "Pampusana_jobiensis"          "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"    
[171] "Phapitreron_brunneiceps"      "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"          
[176] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[181] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[186] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[191] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[196] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[201] "Columba_janthina"             "Columba_pallidiceps"          "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"              
[206] "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"         
[211] "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"              
[216] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[221] "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[226] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[231] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[236] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[241] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[246] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[251] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_modiglianii"      
[256] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[261] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[266] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[271] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[276] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[281] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[286] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[291] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[296] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[301] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[306] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[311] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[316] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[321] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_regina"            "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"       
 [36] "Ptilinopus_rivoli"            "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_superbus"          "Ptilinopus_alligator"        
 [41] "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"           "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"           
 [46] "Ptilinopus_layardi"           "Ptilinopus_luteovirens"       "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"     
 [51] "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"       "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"         
 [56] "Ptilinopus_occipitalis"       "Ptilinopus_marchei"           "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Gymnophaps_albertisii"       
 [61] "Gymnophaps_mada"              "Gymnophaps_stalkeri"          "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"   
 [66] "Ducula_aenea"                 "Ducula_carola"                "Ducula_neglecta"              "Ducula_concinna"              "Ducula_nicobarica"           
 [71] "Ducula_perspicillata"         "Ducula_oenothorax"            "Ducula_pickeringii"           "Ducula_pistrinaria"           "Ducula_whartoni"             
 [76] "Ducula_rosacea"               "Ducula_aurorae"               "Ducula_pacifica"              "Ducula_galeata"               "Ducula_geelvinkiana"         
 [81] "Ducula_myristicivora"         "Ducula_oceanica"              "Ducula_rubricera"             "Ducula_bakeri"                "Ducula_melanochroa"          
 [86] "Ducula_mullerii"              "Ducula_bicolor"               "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"        
 [91] "Ducula_brenchleyi"            "Ducula_pinon"                 "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"             
 [96] "Ducula_finschii"              "Ducula_chalconota"            "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"          
[101] "Ducula_radiata"               "Ducula_poliocephala"          "Ducula_badia"                 "Ducula_lacernulata"           "Ducula_cineracea"            
[106] "Ducula_cuprea"                "Ducula_zoeae"                 "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"              
[111] "Goura_sclaterii"              "Goura_scheepmakeri"           "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"           
[116] "Treron_axillaris"             "Treron_australis"             "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"               
[121] "Treron_sanctithomae"          "Treron_calvus"                "Treron_phoenicopterus"        "Treron_bicinctus"             "Treron_formosae"             
[126] "Treron_vernans"               "Treron_pompadora"             "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"             
[131] "Treron_oxyurus"               "Treron_seimundi"              "Treron_chloropterus"          "Treron_griseicauda"           "Treron_curvirostra"          
[136] "Treron_floris"                "Treron_psittaceus"            "Treron_teysmannii"            "Treron_phayrei"               "Treron_capellei"             
[141] "Treron_fulvicollis"           "Treron_olax"                  "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"          
[146] "Gallicolumba_menagei"         "Gallicolumba_platenae"        "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"    
[151] "Geopelia_cuneata"             "Geopelia_maugeus"             "Geopelia_striata"             "Geophaps_plumifera"           "Geophaps_scripta"            
[156] "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"       "Phaps_elegans"                "Phaps_histrionica"           
[161] "Leucosarcia_melanoleuca"      "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[166] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[171] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[176] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"    
[181] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[186] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[191] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[196] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_decaocto"        "Streptopelia_roseogrisea"    
[201] "Streptopelia_decipiens"       "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"           
[206] "Columba_pollenii"             "Columba_janthina"             "Columba_pallidiceps"          "Columba_unicincta"            "Columba_vitiensis"           
[211] "Columba_trocaz"               "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"             
[216] "Columba_palumboides"          "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"              
[221] "Columba_bollii"               "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"             
[226] "Columba_leuconota"            "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[231] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[236] "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"         "Patagioenas_cayennensis"     
[241] "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"           "Patagioenas_maculosa"        
[246] "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"       "Patagioenas_leucocephala"    
[251] "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"       "Macropygia_cinnamomea"       
[256] "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_modiglianii"       "Macropygia_doreya"           
[261] "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"        "Macropygia_nigrirostris"     
[266] "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"          "Turacoena_modesta"           
[271] "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"     "Geotrygon_caniceps"          
[276] "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"           "Geotrygon_versicolor"        
[281] "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"      "Leptotila_cassinii"          
[286] "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"             "Leptotila_pallida"           
[291] "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"          "Starnoenas_cyanocephala"     
[296] "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"        "Zenaida_macroura"            
[301] "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"           "Zentrygon_goldmani"          
[306] "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"       "Claravis_pretiosa"           
[311] "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"          "Columbina_passerina"         
[316] "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"              "Metriopelia_aymara"          
[321] "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"       "Paraclaravis_mondetoura"     
[326] "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

[1] "Dropping taxa from the distance matrix because they are not present in the community data:"
  [1] "Alectroenas_madagascariensis" "Alectroenas_sganzini"         "Alectroenas_pulcherrimus"     "Drepanoptila_holosericea"     "Ptilinopus_aurantiifrons"    
  [6] "Ptilinopus_granulifrons"      "Ptilinopus_insolitus"         "Ptilinopus_ornatus"           "Ptilinopus_wallacii"          "Ptilinopus_perlatus"         
 [11] "Ptilinopus_hyogastrus"        "Ptilinopus_iozonus"           "Ptilinopus_tannensis"         "Ptilinopus_eugeniae"          "Ptilinopus_viridis"          
 [16] "Ptilinopus_chalcurus"         "Ptilinopus_coralensis"        "Ptilinopus_insularis"         "Ptilinopus_huttoni"           "Ptilinopus_chrysogaster"     
 [21] "Ptilinopus_rarotongensis"     "Ptilinopus_purpuratus"        "Ptilinopus_perousii"          "Ptilinopus_greyi"             "Ptilinopus_porphyraceus"     
 [26] "Ptilinopus_pelewensis"        "Ptilinopus_richardsii"        "Ptilinopus_roseicapilla"      "Ptilinopus_hernsheimi"        "Ptilinopus_ponapensis"       
 [31] "Ptilinopus_dupetithouarsii"   "Ptilinopus_coronulatus"       "Ptilinopus_monacha"           "Ptilinopus_pulchellus"        "Ptilinopus_rivoli"           
 [36] "Ptilinopus_solomonensis"      "Ptilinopus_speciosus"         "Ptilinopus_alligator"         "Ptilinopus_dohertyi"          "Ptilinopus_cinctus"          
 [41] "Ptilinopus_arcanus"           "Ptilinopus_melanospilus"      "Ptilinopus_nainus"            "Ptilinopus_layardi"           "Ptilinopus_luteovirens"      
 [46] "Ptilinopus_victor"            "Ptilinopus_epius"             "Ptilinopus_mangoliensis"      "Ptilinopus_subgularis"        "Ptilinopus_leclancheri"      
 [51] "Ptilinopus_porphyreus"        "Ptilinopus_jambu"             "Ptilinopus_fischeri"          "Ptilinopus_occipitalis"       "Ptilinopus_marchei"          
 [56] "Ptilinopus_merrilli"          "Ptilinopus_bernsteinii"       "Gymnophaps_albertisii"        "Gymnophaps_mada"              "Gymnophaps_stalkeri"         
 [61] "Gymnophaps_solomonensis"      "Hemiphaga_chathamensis"       "Hemiphaga_novaeseelandiae"    "Ducula_aenea"                 "Ducula_carola"               
 [66] "Ducula_neglecta"              "Ducula_concinna"              "Ducula_nicobarica"            "Ducula_perspicillata"         "Ducula_oenothorax"           
 [71] "Ducula_pickeringii"           "Ducula_pistrinaria"           "Ducula_whartoni"              "Ducula_rosacea"               "Ducula_aurorae"              
 [76] "Ducula_pacifica"              "Ducula_galeata"               "Ducula_geelvinkiana"          "Ducula_myristicivora"         "Ducula_oceanica"             
 [81] "Ducula_rubricera"             "Ducula_bakeri"                "Ducula_melanochroa"           "Ducula_mullerii"              "Ducula_bicolor"              
 [86] "Ducula_luctuosa"              "Ducula_spilorrhoa"            "Ducula_subflavescens"         "Ducula_brenchleyi"            "Ducula_pinon"                
 [91] "Ducula_goliath"               "Ducula_latrans"               "Ducula_basilica"              "Ducula_finschii"              "Ducula_chalconota"           
 [96] "Ducula_rufigaster"            "Ducula_forsteni"              "Ducula_mindorensis"           "Ducula_radiata"               "Ducula_poliocephala"         
[101] "Ducula_badia"                 "Ducula_lacernulata"           "Ducula_cineracea"             "Ducula_cuprea"                "Ducula_zoeae"                
[106] "Caloenas_nicobarica"          "Didunculus_strigirostris"     "Goura_cristata"               "Goura_sclaterii"              "Goura_scheepmakeri"          
[111] "Goura_victoria"               "Treron_affinis"               "Treron_aromaticus"            "Treron_axillaris"             "Treron_australis"            
[116] "Treron_griveaudi"             "Treron_pembaensis"            "Treron_waalia"                "Treron_sanctithomae"          "Treron_calvus"               
[121] "Treron_phoenicopterus"        "Treron_bicinctus"             "Treron_formosae"              "Treron_vernans"               "Treron_pompadora"            
[126] "Treron_sieboldii"             "Treron_sphenurus"             "Treron_apicauda"              "Treron_oxyurus"               "Treron_seimundi"             
[131] "Treron_chloropterus"          "Treron_griseicauda"           "Treron_curvirostra"           "Treron_floris"                "Treron_psittaceus"           
[136] "Treron_teysmannii"            "Treron_phayrei"               "Treron_capellei"              "Treron_fulvicollis"           "Treron_olax"                 
[141] "Otidiphaps_nobilis"           "Gallicolumba_crinigera"       "Gallicolumba_keayi"           "Gallicolumba_menagei"         "Gallicolumba_platenae"       
[146] "Gallicolumba_rufigula"        "Gallicolumba_luzonica"        "Gallicolumba_tristigmata"     "Geopelia_cuneata"             "Geopelia_maugeus"            
[151] "Geopelia_striata"             "Geophaps_plumifera"           "Geophaps_smithii"             "Petrophassa_albipennis"       "Petrophassa_rufipennis"      
[156] "Phaps_histrionica"            "Pampusana_beccarii"           "Pampusana_canifrons"          "Pampusana_stairi"             "Pampusana_sanctaecrucis"     
[161] "Pampusana_erythroptera"       "Pampusana_kubaryi"            "Pampusana_rubescens"          "Pampusana_xanthonura"         "Pampusana_jobiensis"         
[166] "Pampusana_hoedtii"            "Henicophaps_albifrons"        "Henicophaps_foersteri"        "Phapitreron_amethystinus"     "Phapitreron_brunneiceps"     
[171] "Phapitreron_cinereiceps"      "Phapitreron_leucotis"         "Trugon_terrestris"            "Chalcophaps_indica"           "Chalcophaps_longirostris"    
[176] "Chalcophaps_stephani"         "Oena_capensis"                "Turtur_abyssinicus"           "Turtur_chalcospilos"          "Turtur_afer"                 
[181] "Turtur_brehmeri"              "Turtur_tympanistria"          "Aplopelia_larvata"            "Streptopelia_bitorquata"      "Streptopelia_dusumieri"      
[186] "Streptopelia_hypopyrrha"      "Streptopelia_turtur"          "Streptopelia_orientalis"      "Streptopelia_lugens"          "Streptopelia_tranquebarica"  
[191] "Streptopelia_xanthocycla"     "Streptopelia_capicola"        "Streptopelia_vinacea"         "Streptopelia_roseogrisea"     "Streptopelia_decipiens"      
[196] "Streptopelia_semitorquata"    "Streptopelia_reichenowi"      "Columba_albinucha"            "Columba_hodgsonii"            "Columba_pollenii"            
[201] "Columba_janthina"             "Columba_pallidiceps"          "Columba_unicincta"            "Columba_vitiensis"            "Columba_trocaz"              
[206] "Columba_sjostedti"            "Columba_argentina"            "Columba_elphinstonii"         "Columba_punicea"              "Columba_palumboides"         
[211] "Columba_pulchricollis"        "Columba_torringtoniae"        "Columba_albitorques"          "Columba_guinea"               "Columba_bollii"              
[216] "Columba_palumbus"             "Columba_eversmanni"           "Columba_oenas"                "Columba_oliviae"              "Columba_leuconota"           
[221] "Columba_livia"                "Columba_rupestris"            "Columba_arquatrix"            "Columba_thomensis"            "Columba_junoniae"            
[226] "Columba_delegorguei"          "Columba_malherbii"            "Columba_iriditorques"         "Nesoenas_mayeri"              "Nesoenas_picturatus"         
[231] "Spilopelia_chinensis"         "Spilopelia_senegalensis"      "Patagioenas_araucana"         "Patagioenas_caribaea"         "Patagioenas_fasciata"        
[236] "Patagioenas_cayennensis"      "Patagioenas_corensis"         "Patagioenas_picazuro"         "Patagioenas_flavirostris"     "Patagioenas_oenops"          
[241] "Patagioenas_maculosa"         "Patagioenas_goodsoni"         "Patagioenas_nigrirostris"     "Patagioenas_plumbea"          "Patagioenas_subvinacea"      
[246] "Patagioenas_leucocephala"     "Patagioenas_speciosa"         "Patagioenas_squamosa"         "Patagioenas_inornata"         "Macropygia_amboinensis"      
[251] "Macropygia_cinnamomea"        "Macropygia_emiliana"          "Macropygia_rufipennis"        "Macropygia_tenuirostris"      "Macropygia_modiglianii"      
[256] "Macropygia_doreya"            "Macropygia_macassariensis"    "Macropygia_magna"             "Macropygia_timorlaoensis"     "Macropygia_mackinlayi"       
[261] "Macropygia_nigrirostris"      "Macropygia_ruficeps"          "Macropygia_unchall"           "Turacoena_manadensis"         "Turacoena_sulaensis"         
[266] "Turacoena_modesta"            "Reinwardtoena_browni"         "Reinwardtoena_reinwardti"     "Reinwardtoena_crassirostris"  "Cryptophaps_poecilorrhoa"    
[271] "Geotrygon_caniceps"           "Geotrygon_leucometopia"       "Geotrygon_violacea"           "Geotrygon_chrysia"            "Geotrygon_mystacea"          
[276] "Geotrygon_versicolor"         "Geotrygon_montana"            "Geotrygon_purpurata"          "Geotrygon_saphirina"          "Leptotrygon_veraguensis"     
[281] "Leptotila_cassinii"           "Leptotila_conoveri"           "Leptotila_ochraceiventris"    "Leptotila_plumbeiceps"        "Leptotila_wellsi"            
[286] "Leptotila_pallida"            "Leptotila_rufaxilla"          "Leptotila_megalura"           "Leptotila_jamaicensis"        "Leptotila_verreauxi"         
[291] "Starnoenas_cyanocephala"      "Zenaida_asiatica"             "Zenaida_meloda"               "Zenaida_auriculata"           "Zenaida_galapagoensis"       
[296] "Zenaida_macroura"             "Zenaida_aurita"               "Zentrygon_albifacies"         "Zentrygon_frenata"            "Zentrygon_linearis"          
[301] "Zentrygon_goldmani"           "Zentrygon_carrikeri"          "Zentrygon_lawrencii"          "Zentrygon_costaricensis"      "Zentrygon_chiriquensis"      
[306] "Claravis_pretiosa"            "Columbina_buckleyi"           "Columbina_cyanopis"           "Columbina_minuta"             "Columbina_talpacoti"         
[311] "Columbina_passerina"          "Columbina_inca"               "Columbina_squammata"          "Columbina_cruziana"           "Columbina_picui"             
[316] "Metriopelia_aymara"           "Metriopelia_ceciliae"         "Metriopelia_morenoi"          "Metriopelia_melanoptera"      "Paraclaravis_geoffroyi"      
[321] "Paraclaravis_mondetoura"      "Uropelia_campestris"         

Joining with `by = join_by(ebird_species_name)`

result_df = result_df %>% mutate(type = as.factor(type), city_id = factor(city_id))
result_df

str(result_df)

tibble [491 × 8] (S3: tbl_df/tbl/data.frame)
 $ city_id            : Factor w/ 123 levels "10","29","57",..: 1 1 1 2 2 2 3 3 3 4 ...
 $ city_name          : chr [1:491] "San Jose" "San Jose" "San Jose" "Bakersfield" ...
 $ ebird_species_name : chr [1:491] "Columba livia" "Streptopelia decaocto" "Columbina passerina" "Columba livia" ...
 $ type               : Factor w/ 2 levels "Available","Introduced": 2 2 1 2 2 1 2 2 1 2 ...
 $ min_dist_beak_width: num [1:491] 1.6 1.1 0.2 1.6 1.1 ...
 $ min_dist_mass      : num [1:491] 12.1 30.1 83.5 12.1 30.1 ...
 $ min_dist_hwi       : num [1:491] 8.5 0.1 10.6 8.5 0.1 ...
 $ min_phylo_dist     : Named num [1:491] 40.7 40.7 76.4 40.7 40.7 ...
  ..- attr(*, "names")= chr [1:491] "Columba_livia" "Streptopelia_decaocto" "" "Columba_livia" ...

Analysis results

Plots

ggplot(result_df, aes(x = type, y = min_dist_beak_width)) + geom_boxplot()

ggplot(result_df, aes(x = type, y = min_dist_hwi)) + geom_boxplot()

ggplot(result_df, aes(x = type, y = min_dist_mass)) + geom_boxplot()

ggplot(result_df, aes(x = type, y = min_phylo_dist)) + geom_boxplot()

Models

levels(factor(result_df$type))

[1] "Available"  "Introduced"

check_distances_near_zero = result_df %>%
  group_by(type) %>%
  summarise(
    n = n(),
    bw_zeros = sum(min_dist_beak_width == 0),
    bw_p_zero = mean(min_dist_beak_width == 0),
    bw_median = median(min_dist_beak_width),
    hwi_zeros = sum(min_dist_hwi == 0),
    hwi_p_zero = mean(min_dist_hwi == 0),
    hwi_median = median(min_dist_hwi),
    mass_zeros = sum(min_dist_mass == 0),
    mass_p_zero = mean(min_dist_mass == 0),
    mass_median = median(min_dist_mass),
    phylo_zeros = sum(min_phylo_dist == 0),
    phylo_p_zero = mean(min_phylo_dist == 0),
    phylo_median = median(min_phylo_dist)
  )
check_distances_near_zero

City random factor

Using Tweedie GLMM (good default when zeros exist)

library(glmmTMB)
library(DHARMa)

Beak width

mt_dis_beak_width = glmmTMB(
  min_dist_beak_width ~ type + (1 | city_id),
  family = tweedie(link = "log"),
  dispformula = ~ type,
  data = result_df
)

summary(mt_dis_beak_width)

 Family: tweedie  ( log )
Formula:          min_dist_beak_width ~ type + (1 | city_id)
Dispersion:                           ~type
Data: result_df

      AIC       BIC    logLik -2*log(L)  df.resid 
    582.9     608.0    -285.4     570.9       485 

Random effects:

Conditional model:
 Groups  Name        Variance Std.Dev.
 city_id (Intercept) 0.47     0.6856  
Number of obs: 491, groups:  city_id, 123

Conditional model:
               Estimate Std. Error z value             Pr(>|z|)    
(Intercept)    -0.70727    0.08213  -8.611 < 0.0000000000000002 ***
typeIntroduced -0.33238    0.07115  -4.672           0.00000299 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

Dispersion model:
               Estimate Std. Error z value       Pr(>|z|)    
(Intercept)     -0.6655     0.1011  -6.580 0.000000000047 ***
typeIntroduced  -0.9889     0.1609  -6.148 0.000000000786 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

# Diagnostics
res_dis_beak_width = simulateResiduals(mt_dis_beak_width)
plot(res_dis_beak_width, form = factor(result_df$type))

# Test the group effect (Wald)
car::Anova(mt_dis_beak_width, type = 2)

Analysis of Deviance Table (Type II Wald chisquare tests)

Response: min_dist_beak_width
      Chisq Df  Pr(>Chisq)    
type 21.824  1 0.000002989 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

Is random effect needed?

mt0_dis_beak_width =glmmTMB(
  min_dist_beak_width ~ type,
  family = tweedie(link = "log"),
  dispformula = ~ type,
  data = result_df
)
anova(mt0_dis_beak_width, mt_dis_beak_width)

Data: result_df
Models:
mt0_dis_beak_width: min_dist_beak_width ~ type, zi=~0, disp=~type
mt_dis_beak_width: min_dist_beak_width ~ type + (1 | city_id), zi=~0, disp=~type
                   Df    AIC    BIC  logLik deviance Chisq Chi Df            Pr(>Chisq)    
mt0_dis_beak_width  5 743.65 764.63 -366.82   733.65                                       
mt_dis_beak_width   6 582.85 608.03 -285.43   570.85 162.8      1 < 0.00000000000000022 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

testDispersion(res_dis_beak_width)

    DHARMa nonparametric dispersion test via sd of residuals fitted vs. simulated

data:  simulationOutput
dispersion = 1.0777, p-value = 0.6
alternative hypothesis: two.sided

testZeroInflation(res_dis_beak_width)

    DHARMa zero-inflation test via comparison to expected zeros with simulation under H0 = fitted model

data:  simulationOutput
ratioObsSim = 0.95223, p-value = 0.832
alternative hypothesis: two.sided

testOutliers(res_dis_beak_width)

    DHARMa outlier test based on exact binomial test with approximate expectations

data:  res_dis_beak_width
outliers at both margin(s) = 9, observations = 491, p-value = 0.01842
alternative hypothesis: true probability of success is not equal to 0.007968127
95 percent confidence interval:
 0.00841502 0.03450982
sample estimates:
frequency of outliers (expected: 0.00796812749003984 ) 
                                            0.01832994 

idx = which(res_dis_beak_width$scaledResiduals < 0.01 | res_dis_beak_width$scaledResiduals > 0.99)
result_df[idx, c("min_dist_beak_width", "type", "city_id", "city_name")]

Effect sizes

library(emmeans)
emmeans(mt_dis_beak_width, ~ type, type = "response")     # back on original scale
contrast(emmeans(mt_dis_beak_width, ~ type, type = "response"), "pairwise")

These are the expected values of min_dist_beak_width for each type, averaged over the random effects, and then back-transformed to the response scale: * Available: 0.493 (SE 0.0405), 95% CI 0.420 to 0.579 * Introduced: 0.354 (SE 0.0280), 95% CI 0.303 to 0.413

Interpretation: the model estimates that Available is ~1.39× (≈ 40%) higher than Introduced, on average, after accounting for city-level clustering.

HWI

mt_hwi = glmmTMB(
  min_dist_hwi ~ type + (1 | city_id),
  family = tweedie(link = "log"),
  dispformula = ~ type,
  data = result_df
)

summary(mt_hwi)

 Family: tweedie  ( log )
Formula:          min_dist_hwi ~ type + (1 | city_id)
Dispersion:                    ~type
Data: result_df

      AIC       BIC    logLik -2*log(L)  df.resid 
   1845.0    1870.2    -916.5    1833.0       485 

Random effects:

Conditional model:
 Groups  Name        Variance Std.Dev.
 city_id (Intercept) 0.0821   0.2865  
Number of obs: 491, groups:  city_id, 123

Conditional model:
               Estimate Std. Error z value             Pr(>|z|)    
(Intercept)     0.37220    0.05592   6.656      0.0000000000281 ***
typeIntroduced  1.29645    0.07866  16.481 < 0.0000000000000002 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

Dispersion model:
               Estimate Std. Error z value Pr(>|z|)    
(Intercept)     -0.3073     0.0844  -3.641 0.000272 ***
typeIntroduced   0.3164     0.1561   2.027 0.042687 *  
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

# Diagnostics
res_hwi = simulateResiduals(mt_hwi)
plot(res_hwi, form = factor(result_df$type))

# Test the group effect (Wald)
car::Anova(mt_hwi, type = 2)

Analysis of Deviance Table (Type II Wald chisquare tests)

Response: min_dist_hwi
      Chisq Df            Pr(>Chisq)    
type 271.61  1 < 0.00000000000000022 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

testDispersion(res_hwi)

    DHARMa nonparametric dispersion test via sd of residuals fitted vs. simulated

data:  simulationOutput
dispersion = 0.69334, p-value = 0.048
alternative hypothesis: two.sided

testZeroInflation(res_hwi)

    DHARMa zero-inflation test via comparison to expected zeros with simulation under H0 = fitted model

data:  simulationOutput
ratioObsSim = 1.2195, p-value = 0.816
alternative hypothesis: two.sided

testOutliers(res_hwi)

    DHARMa outlier test based on exact binomial test with approximate expectations

data:  res_hwi
outliers at both margin(s) = 10, observations = 491, p-value = 0.006796
alternative hypothesis: true probability of success is not equal to 0.007968127
95 percent confidence interval:
 0.009808738 0.037135196
sample estimates:
frequency of outliers (expected: 0.00796812749003984 ) 
                                             0.0203666 

Effect sizes

library(emmeans)
emmeans(mt_hwi, ~ type, type = "response")     # back on original scale

 type       response     SE  df asymp.LCL asymp.UCL
 Available      1.45 0.0811 Inf      1.30      1.62
 Introduced     5.31 0.3530 Inf      4.66      6.04

Confidence level used: 0.95 
Intervals are back-transformed from the log scale 

contrast(emmeans(mt_hwi, ~ type, type = "response"), "pairwise")

 contrast               ratio     SE  df null z.ratio p.value
 Available / Introduced 0.274 0.0215 Inf    1 -16.481  <.0001

Tests are performed on the log scale 

model estimates: * Available: 1.45 (95% CI 1.30 – 1.62) * Introduced: 5.31 (95% CI 4.66 – 6.04)

Interpretation: Available is only 0.274× Introduced — i.e. ~72% lower.

mt_mass = glmmTMB(
  min_dist_mass ~ type + (1 | city_id),
  family = tweedie(link = "log"),
  dispformula = ~ type,
  data = result_df
)

summary(mt_mass)

 Family: tweedie  ( log )
Formula:          min_dist_mass ~ type + (1 | city_id)
Dispersion:                     ~type
Data: result_df

      AIC       BIC    logLik -2*log(L)  df.resid 
   4887.1    4912.3   -2437.6    4875.1       485 

Random effects:

Conditional model:
 Groups  Name        Variance Std.Dev.
 city_id (Intercept) 0.2729   0.5224  
Number of obs: 491, groups:  city_id, 123

Conditional model:
               Estimate Std. Error z value             Pr(>|z|)    
(Intercept)     3.68210    0.07709   47.76 < 0.0000000000000002 ***
typeIntroduced  0.56528    0.10154    5.57         0.0000000259 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

Dispersion model:
               Estimate Std. Error z value Pr(>|z|)   
(Intercept)     0.30361    0.09321   3.257  0.00112 **
typeIntroduced  0.14547    0.12957   1.123  0.26155   
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

# Diagnostics
res_mass = simulateResiduals(mt_mass)
plot(res_mass, form = factor(result_df$type))

# Test the group effect (Wald)
car::Anova(mt_mass, type = 2)

Analysis of Deviance Table (Type II Wald chisquare tests)

Response: min_dist_mass
      Chisq Df    Pr(>Chisq)    
type 30.995  1 0.00000002587 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

testDispersion(res_mass)

    DHARMa nonparametric dispersion test via sd of residuals fitted vs. simulated

data:  simulationOutput
dispersion = 0.91492, p-value = 0.936
alternative hypothesis: two.sided

testZeroInflation(res_mass)

    DHARMa zero-inflation test via comparison to expected zeros with simulation under H0 = fitted model

data:  simulationOutput
ratioObsSim = 62.5, p-value = 0.032
alternative hypothesis: two.sided

testOutliers(res_mass)

    DHARMa outlier test based on exact binomial test with approximate expectations

data:  res_mass
outliers at both margin(s) = 7, observations = 491, p-value = 0.1206
alternative hypothesis: true probability of success is not equal to 0.007968127
95 percent confidence interval:
 0.005750604 0.029152449
sample estimates:
frequency of outliers (expected: 0.00796812749003984 ) 
                                            0.01425662 

Effect sizes

library(emmeans)
emmeans(mt_mass, ~ type, type = "response")     # back on original scale

 type       response   SE  df asymp.LCL asymp.UCL
 Available      39.7 3.06 Inf      34.2      46.2
 Introduced     69.9 6.62 Inf      58.1      84.2

Confidence level used: 0.95 
Intervals are back-transformed from the log scale 

contrast(emmeans(mt_mass, ~ type, type = "response"), "pairwise")

 contrast               ratio     SE  df null z.ratio p.value
 Available / Introduced 0.568 0.0577 Inf    1  -5.567  <.0001

Tests are performed on the log scale 

model estimates: * Available: 39.7 (SE 3.08), 95% CI 34.2 – 46.2 * Introduced: 69.9 (SE 6.36), 95% CI 58.1 – 84.2

Interpretation: Available is 0.558× Introduced — i.e. about 43% lower.

min(result_df$min_phylo_dist)

[1] 16.1966

mt_phylo_dist = glmmTMB(
  min_phylo_dist ~ type + (1 | city_id),
  family = Gamma(link = "log"),
  data = result_df
)

summary(mt_phylo_dist)

 Family: Gamma  ( log )
Formula:          min_phylo_dist ~ type + (1 | city_id)
Data: result_df

      AIC       BIC    logLik -2*log(L)  df.resid 
   3911.8    3928.6   -1951.9    3903.8       487 

Random effects:

Conditional model:
 Groups  Name        Variance Std.Dev.
 city_id (Intercept) 0.1471   0.3836  
Number of obs: 491, groups:  city_id, 123

Dispersion estimate for Gamma family (sigma^2): 0.0634 

Conditional model:
               Estimate Std. Error z value            Pr(>|z|)    
(Intercept)     3.57135    0.03803   93.90 <0.0000000000000002 ***
typeIntroduced  0.29613    0.02579   11.48 <0.0000000000000002 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

# Diagnostics
res_phylo_dist = simulateResiduals(mt_phylo_dist)
plot(res_phylo_dist, form = factor(result_df$type))

# Test the group effect (Wald)
car::Anova(mt_phylo_dist, type = 2)

Analysis of Deviance Table (Type II Wald chisquare tests)

Response: min_phylo_dist
      Chisq Df            Pr(>Chisq)    
type 131.83  1 < 0.00000000000000022 ***
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

library(emmeans)
emmeans(mt_phylo_dist, ~ type, type = "response")     # back on original scale

 type       response   SE  df asymp.LCL asymp.UCL
 Available      35.6 1.35 Inf      33.0      38.3
 Introduced     47.8 1.93 Inf      44.2      51.8

Confidence level used: 0.95 
Intervals are back-transformed from the log scale 

contrast(emmeans(mt_phylo_dist, ~ type, type = "response"), "pairwise")

 contrast               ratio     SE  df null z.ratio p.value
 Available / Introduced 0.744 0.0192 Inf    1 -11.482  <.0001

Tests are performed on the log scale 

Model-based expected values: * Available: 35.6 (SE 1.35), 95% CI 33.0 – 38.3 * Introduced: 47.8 (SE 1.93), 95% CI 44.2 – 51.8

Interpretation: Available is 0.744× Introduced, i.e. about 25.6% lower.